Ah gotcha.

I ran an antivirus scan and It showed nothing (Using Malwarebytes and Adware Cleaner, with a windows scan planned for later today), I hadn't seen the message again as of this writing so It not one of those repeat check errors or chkdsk situations so theres that, I also looked to check the chkdsk results though I didn't see anything wrong, though I dont know what to look out for. So maybe it was just an improper shutdown?